STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sec11aSignal sequence peptidase. (217 aa)    
Predicted Functional Partners:
sec11b
Signal sequence peptidase.
 
  
 
0.950
HAH_0243
Peptidase S26B, signal peptidase.
     
  0.900
atpF
A-type ATP synthase subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
  
  0.805
secE
Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
 0.780
HAH_0434
M50 metallopeptidase.
 
  
 0.776
coxA2
Cytochrome c oxidase subunit I.
  
   
 0.775
stt3
Transmembrane oligosaccharyl transferase.
  
  
 0.772
atpK
A-type ATP synthase sununit K.
 
  
 0.765
dnaN2
DNA polymerase sliding clamp.
 
    0.764
atpE
A-type ATP synthase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
  
 0.763
Your Current Organism:
Haloarcula hispanica
NCBI taxonomy Id: 634497
Other names: H. hispanica ATCC 33960, Haloarcula hispanica ATCC 33960, Haloarcula hispanica DSM 4426, Haloarcula hispanica JCM 8911, Haloarcula hispanica str. ATCC 33960, Haloarcula hispanica strain ATCC 33960
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.