STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HAH_0015Conserved hypothetical protein. (124 aa)    
Predicted Functional Partners:
pepB1
Aminopeptidase.
 
     0.605
HAH_0665
TrkA-C domain protein.
  
     0.562
HAH_2439
Haloacid dehalogenase domain protein hydrolase.
  
     0.482
HAH_0013
Conserved hypothetical protein.
       0.479
HAH_3084
Lysine biosynthesis protein LysW.
  
     0.464
arsR1
Transcriptional regulator, ArsR family.
 
     0.462
udg3
Uracil DNA glycosylase superfamily protein.
  
     0.441
argE1
Acetyl-lysine deacetylase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine and the release of L-ornithine from [LysW]-L-ornithine.
  
     0.436
HAH_1021
Conserved hypothetical protein.
  
     0.428
argX
L-2-aminoadipate N-acetyltransferase.
  
     0.419
Your Current Organism:
Haloarcula hispanica
NCBI taxonomy Id: 634497
Other names: H. hispanica ATCC 33960, Haloarcula hispanica ATCC 33960, Haloarcula hispanica DSM 4426, Haloarcula hispanica JCM 8911, Haloarcula hispanica str. ATCC 33960, Haloarcula hispanica strain ATCC 33960
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.