STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hpaG12-hydroxyhepta-2,4-diene-1,7-dioate isomerase. (238 aa)    
Predicted Functional Partners:
dgoA2
Mandelate racemase/muconate lactonizing enzyme family protein.
  
  
 0.597
HAH_1926
Fumarylacetoacetate hydrolase family protein.
 
   
 0.560
malG
Maltose ABC transporter permease protein.
      
 0.551
malE
Maltose ABC transporter maltose-binding protein.
      
 0.551
fruK
1-phosphofructokinase.
     
 0.546
HAH_0291
Xylose dehydrogenase.
     
 0.529
aldY3
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.527
aldY1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
  
 
 0.527
aldY4
Aldehyde dehydrogenase.
  
 
 0.527
aldY2
Aldehyde dehydrogenase.
  
 
 0.527
Your Current Organism:
Haloarcula hispanica
NCBI taxonomy Id: 634497
Other names: H. hispanica ATCC 33960, Haloarcula hispanica ATCC 33960, Haloarcula hispanica DSM 4426, Haloarcula hispanica JCM 8911, Haloarcula hispanica str. ATCC 33960, Haloarcula hispanica strain ATCC 33960
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.