Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HAH_0317 | HAH_0923 | HAH_0317 | HAH_0923 | Transcriptional regulator, TrmB. | Transcription regulator. | 0.450 |
HAH_0317 | HAH_1002 | HAH_0317 | HAH_1002 | Transcriptional regulator, TrmB. | Conserved hypothetical protein. | 0.402 |
HAH_0317 | HAH_2795 | HAH_0317 | HAH_2795 | Transcriptional regulator, TrmB. | Transcription regulator. | 0.492 |
HAH_0317 | fdoH | HAH_0317 | HAH_1920 | Transcriptional regulator, TrmB. | Formate dehydrogenase, iron-sulfur subunit. | 0.446 |
HAH_0317 | hmoA | HAH_0317 | HAH_1808 | Transcriptional regulator, TrmB. | Molybdopterin oxidoreductase. | 0.446 |
HAH_0317 | qacE | HAH_0317 | HAH_0316 | Transcriptional regulator, TrmB. | Quaternary ammonium compound-resistance protein; Small multidrug resistance protein. | 0.542 |
HAH_0317 | trmB2 | HAH_0317 | HAH_1548 | Transcriptional regulator, TrmB. | Sugar-specific transcriptional regulator TrmB. | 0.646 |
HAH_0923 | HAH_0317 | HAH_0923 | HAH_0317 | Transcription regulator. | Transcriptional regulator, TrmB. | 0.450 |
HAH_0923 | fdoH | HAH_0923 | HAH_1920 | Transcription regulator. | Formate dehydrogenase, iron-sulfur subunit. | 0.446 |
HAH_0923 | hmoA | HAH_0923 | HAH_1808 | Transcription regulator. | Molybdopterin oxidoreductase. | 0.446 |
HAH_1002 | HAH_0317 | HAH_1002 | HAH_0317 | Conserved hypothetical protein. | Transcriptional regulator, TrmB. | 0.402 |
HAH_1002 | trmB2 | HAH_1002 | HAH_1548 | Conserved hypothetical protein. | Sugar-specific transcriptional regulator TrmB. | 0.404 |
HAH_2795 | HAH_0317 | HAH_2795 | HAH_0317 | Transcription regulator. | Transcriptional regulator, TrmB. | 0.492 |
HAH_2795 | fdoH | HAH_2795 | HAH_1920 | Transcription regulator. | Formate dehydrogenase, iron-sulfur subunit. | 0.446 |
HAH_2795 | hmoA | HAH_2795 | HAH_1808 | Transcription regulator. | Molybdopterin oxidoreductase. | 0.446 |
fdoH | HAH_0317 | HAH_1920 | HAH_0317 | Formate dehydrogenase, iron-sulfur subunit. | Transcriptional regulator, TrmB. | 0.446 |
fdoH | HAH_0923 | HAH_1920 | HAH_0923 | Formate dehydrogenase, iron-sulfur subunit. | Transcription regulator. | 0.446 |
fdoH | HAH_2795 | HAH_1920 | HAH_2795 | Formate dehydrogenase, iron-sulfur subunit. | Transcription regulator. | 0.446 |
fdoH | trmB2 | HAH_1920 | HAH_1548 | Formate dehydrogenase, iron-sulfur subunit. | Sugar-specific transcriptional regulator TrmB. | 0.446 |
hmoA | HAH_0317 | HAH_1808 | HAH_0317 | Molybdopterin oxidoreductase. | Transcriptional regulator, TrmB. | 0.446 |
page 1 of 2