Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HAH_0492 | HAH_0505 | HAH_0492 | HAH_0505 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.505 |
HAH_0492 | HAH_0667 | HAH_0492 | HAH_0667 | Conserved hypothetical protein. | Putative signal-transducing histidine kinase. | 0.528 |
HAH_0492 | blh | HAH_0492 | HAH_2561 | Conserved hypothetical protein. | Brp-like protein; Catalyzes the cleavage of beta-carotene at its central double bond (15,15') to yield two molecules of all-trans-retinal. Belongs to the Brp/Blh beta-carotene diooxygenase family. | 0.629 |
HAH_0492 | dnaN2 | HAH_0492 | HAH_4097 | Conserved hypothetical protein. | DNA polymerase sliding clamp. | 0.403 |
HAH_0492 | dnaN3 | HAH_0492 | HAH_4158 | Conserved hypothetical protein. | DNA polymerase sliding clamp. | 0.406 |
HAH_0492 | hop | HAH_0492 | HAH_2200 | Conserved hypothetical protein. | Halorhodopsin precursor. | 0.542 |
HAH_0492 | oye2 | HAH_0492 | HAH_2068 | Conserved hypothetical protein. | Putative light- and oxygen-sensing transcription regulator. | 0.417 |
HAH_0505 | HAH_0492 | HAH_0505 | HAH_0492 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.505 |
HAH_0505 | HAH_0667 | HAH_0505 | HAH_0667 | Conserved hypothetical protein. | Putative signal-transducing histidine kinase. | 0.540 |
HAH_0505 | blh | HAH_0505 | HAH_2561 | Conserved hypothetical protein. | Brp-like protein; Catalyzes the cleavage of beta-carotene at its central double bond (15,15') to yield two molecules of all-trans-retinal. Belongs to the Brp/Blh beta-carotene diooxygenase family. | 0.499 |
HAH_0505 | oye2 | HAH_0505 | HAH_2068 | Conserved hypothetical protein. | Putative light- and oxygen-sensing transcription regulator. | 0.612 |
HAH_0667 | HAH_0492 | HAH_0667 | HAH_0492 | Putative signal-transducing histidine kinase. | Conserved hypothetical protein. | 0.528 |
HAH_0667 | HAH_0505 | HAH_0667 | HAH_0505 | Putative signal-transducing histidine kinase. | Conserved hypothetical protein. | 0.540 |
HAH_0667 | blh | HAH_0667 | HAH_2561 | Putative signal-transducing histidine kinase. | Brp-like protein; Catalyzes the cleavage of beta-carotene at its central double bond (15,15') to yield two molecules of all-trans-retinal. Belongs to the Brp/Blh beta-carotene diooxygenase family. | 0.621 |
HAH_0667 | dnaN2 | HAH_0667 | HAH_4097 | Putative signal-transducing histidine kinase. | DNA polymerase sliding clamp. | 0.535 |
HAH_0667 | dnaN3 | HAH_0667 | HAH_4158 | Putative signal-transducing histidine kinase. | DNA polymerase sliding clamp. | 0.528 |
HAH_0667 | hat2 | HAH_0667 | HAH_0668 | Putative signal-transducing histidine kinase. | GNAT family acetyltransferase. | 0.691 |
HAH_0667 | hop | HAH_0667 | HAH_2200 | Putative signal-transducing histidine kinase. | Halorhodopsin precursor. | 0.599 |
HAH_0667 | htrA1 | HAH_0667 | HAH_1037 | Putative signal-transducing histidine kinase. | Serine protease HtrA. | 0.534 |
HAH_0667 | oye2 | HAH_0667 | HAH_2068 | Putative signal-transducing histidine kinase. | Putative light- and oxygen-sensing transcription regulator. | 0.524 |
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