STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
coxB1Cytochrome c oxidase subunit II. (254 aa)    
Predicted Functional Partners:
coxA4
Cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
 
 0.999
ctaB
Protoheme IX farnesyltransferase / heme synthase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
  
 0.994
coxA3
Cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
 
 0.989
coxA1
Cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
 
 0.986
nuoCD1
NADH dehydrogenase, subunit CD (ubiquinone).
   
 
 0.982
nuoCD2
NADH dehydrogenase, subunit CD (ubiquinone).
   
 
 0.982
coxC1
Cytochrome c oxidase subunit III.
 
 0.981
cbaA
Cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
 
 0.981
coxC2
Cytochrome c oxidase subunit III.
 
 0.981
nuoH
NADH dehydrogenase, subunit H (ubiquinone).
  
 0.943
Your Current Organism:
Haloarcula hispanica
NCBI taxonomy Id: 634497
Other names: H. hispanica ATCC 33960, Haloarcula hispanica ATCC 33960, Haloarcula hispanica DSM 4426, Haloarcula hispanica JCM 8911, Haloarcula hispanica str. ATCC 33960, Haloarcula hispanica strain ATCC 33960
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.