Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HAH_0962 | HAH_0963 | HAH_0962 | HAH_0963 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.854 |
HAH_0962 | blh | HAH_0962 | HAH_2561 | Conserved hypothetical protein. | Brp-like protein; Catalyzes the cleavage of beta-carotene at its central double bond (15,15') to yield two molecules of all-trans-retinal. Belongs to the Brp/Blh beta-carotene diooxygenase family. | 0.477 |
HAH_0962 | gcd14 | HAH_0962 | HAH_0961 | Conserved hypothetical protein. | tRNA (adenine-N1-)-methyltransferase. | 0.584 |
HAH_0962 | nac2 | HAH_0962 | HAH_0960 | Conserved hypothetical protein. | Nascent polypeptide-associated complex protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. | 0.584 |
HAH_0963 | HAH_0962 | HAH_0963 | HAH_0962 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.854 |
HAH_0963 | gcd14 | HAH_0963 | HAH_0961 | Conserved hypothetical protein. | tRNA (adenine-N1-)-methyltransferase. | 0.578 |
HAH_0963 | nac2 | HAH_0963 | HAH_0960 | Conserved hypothetical protein. | Nascent polypeptide-associated complex protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. | 0.578 |
blh | HAH_0962 | HAH_2561 | HAH_0962 | Brp-like protein; Catalyzes the cleavage of beta-carotene at its central double bond (15,15') to yield two molecules of all-trans-retinal. Belongs to the Brp/Blh beta-carotene diooxygenase family. | Conserved hypothetical protein. | 0.477 |
gcd14 | HAH_0962 | HAH_0961 | HAH_0962 | tRNA (adenine-N1-)-methyltransferase. | Conserved hypothetical protein. | 0.584 |
gcd14 | HAH_0963 | HAH_0961 | HAH_0963 | tRNA (adenine-N1-)-methyltransferase. | Conserved hypothetical protein. | 0.578 |
gcd14 | nac2 | HAH_0961 | HAH_0960 | tRNA (adenine-N1-)-methyltransferase. | Nascent polypeptide-associated complex protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. | 0.854 |
nac2 | HAH_0962 | HAH_0960 | HAH_0962 | Nascent polypeptide-associated complex protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. | Conserved hypothetical protein. | 0.584 |
nac2 | HAH_0963 | HAH_0960 | HAH_0963 | Nascent polypeptide-associated complex protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. | Conserved hypothetical protein. | 0.578 |
nac2 | gcd14 | HAH_0960 | HAH_0961 | Nascent polypeptide-associated complex protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. | tRNA (adenine-N1-)-methyltransferase. | 0.854 |