Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
bdhA | livF2 | HAH_1303 | HAH_1298 | D-beta-hydroxybutyrate dehydrogenase. | Branched-chain amino acid ABC transporter ATP-binding protein. | 0.457 |
bdhA | livG3 | HAH_1303 | HAH_1299 | D-beta-hydroxybutyrate dehydrogenase. | Branched-chain amino acid ABC transporter ATP-binding protein. | 0.457 |
bdhA | livH3 | HAH_1303 | HAH_1301 | D-beta-hydroxybutyrate dehydrogenase. | Branched-chain amino acid ABC transporter permease protein. | 0.459 |
bdhA | livK3 | HAH_1303 | HAH_1302 | D-beta-hydroxybutyrate dehydrogenase. | ABC transporter substrate-binding protein. | 0.458 |
bdhA | livM3 | HAH_1303 | HAH_1300 | D-beta-hydroxybutyrate dehydrogenase. | Branched-chain amino acid ABC transporter permease protein. | 0.459 |
livF2 | bdhA | HAH_1298 | HAH_1303 | Branched-chain amino acid ABC transporter ATP-binding protein. | D-beta-hydroxybutyrate dehydrogenase. | 0.457 |
livF2 | livG3 | HAH_1298 | HAH_1299 | Branched-chain amino acid ABC transporter ATP-binding protein. | Branched-chain amino acid ABC transporter ATP-binding protein. | 0.903 |
livF2 | livH3 | HAH_1298 | HAH_1301 | Branched-chain amino acid ABC transporter ATP-binding protein. | Branched-chain amino acid ABC transporter permease protein. | 0.887 |
livF2 | livH9 | HAH_1298 | HAH_4346 | Branched-chain amino acid ABC transporter ATP-binding protein. | Branched-chain amino acid ABC transporter permease protein. | 0.844 |
livF2 | livK3 | HAH_1298 | HAH_1302 | Branched-chain amino acid ABC transporter ATP-binding protein. | ABC transporter substrate-binding protein. | 0.809 |
livF2 | livK5 | HAH_1298 | HAH_1985 | Branched-chain amino acid ABC transporter ATP-binding protein. | Branched-chain amino acid ABC transporter amino acid-binding protein. | 0.564 |
livF2 | livK6 | HAH_1298 | HAH_2493 | Branched-chain amino acid ABC transporter ATP-binding protein. | Branched-chain amino acid ABC transporter amino acid-binding protein. | 0.471 |
livF2 | livM1 | HAH_1298 | HAH_0397 | Branched-chain amino acid ABC transporter ATP-binding protein. | Branched-chain amino acid ABC transporter permease protein. | 0.635 |
livF2 | livM3 | HAH_1298 | HAH_1300 | Branched-chain amino acid ABC transporter ATP-binding protein. | Branched-chain amino acid ABC transporter permease protein. | 0.925 |
livG3 | bdhA | HAH_1299 | HAH_1303 | Branched-chain amino acid ABC transporter ATP-binding protein. | D-beta-hydroxybutyrate dehydrogenase. | 0.457 |
livG3 | livF2 | HAH_1299 | HAH_1298 | Branched-chain amino acid ABC transporter ATP-binding protein. | Branched-chain amino acid ABC transporter ATP-binding protein. | 0.903 |
livG3 | livH3 | HAH_1299 | HAH_1301 | Branched-chain amino acid ABC transporter ATP-binding protein. | Branched-chain amino acid ABC transporter permease protein. | 0.949 |
livG3 | livH9 | HAH_1299 | HAH_4346 | Branched-chain amino acid ABC transporter ATP-binding protein. | Branched-chain amino acid ABC transporter permease protein. | 0.930 |
livG3 | livK3 | HAH_1299 | HAH_1302 | Branched-chain amino acid ABC transporter ATP-binding protein. | ABC transporter substrate-binding protein. | 0.847 |
livG3 | livK5 | HAH_1299 | HAH_1985 | Branched-chain amino acid ABC transporter ATP-binding protein. | Branched-chain amino acid ABC transporter amino acid-binding protein. | 0.672 |
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