STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaH3-hydroxybutyryl-CoA dehydrogenase. (285 aa)    
Predicted Functional Partners:
ech4
enoyl-CoA hydratase.
 0.995
yqeF
acetyl-CoA acetyltransferase.
 
 0.978
acaB3
3-ketoacyl-CoA thiolase.
  
 0.978
acaB4
acetyl-CoA C-acetyltransferase / 3-ketoacyl-CoA thiolase.
  
 0.977
acaB2
acetyl-CoA C-acetyltransferase / 3-ketoacyl-CoA thiolase.
  
 0.977
acaB1
acetyl-CoA C-acetyltransferase / 3-ketoacyl-CoA thiolase.
  
 0.975
ech3
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.945
hbd1
3-hydroxyacyl-CoA dehydrogenase.
  
  
 
0.916
acaA
Acyl carrier protein synthase.
    
 0.906
hbd3
3-hydroxyacyl-CoA dehydrogenase.
  
  
 
0.904
Your Current Organism:
Haloarcula hispanica
NCBI taxonomy Id: 634497
Other names: H. hispanica ATCC 33960, Haloarcula hispanica ATCC 33960, Haloarcula hispanica DSM 4426, Haloarcula hispanica JCM 8911, Haloarcula hispanica str. ATCC 33960, Haloarcula hispanica strain ATCC 33960
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.