Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HAH_1724 | HAH_2570 | HAH_1724 | HAH_2570 | Beta-lactamase domain protein. | Beta-lactamase domain protein. | 0.481 |
HAH_1724 | hlx4 | HAH_1724 | HAH_1725 | Beta-lactamase domain protein. | HoxA-like transcriptional regulator / response regulator receiver protein. | 0.577 |
HAH_1724 | noxA2 | HAH_1724 | HAH_0592 | Beta-lactamase domain protein. | NADH oxidase. | 0.570 |
HAH_1724 | truA | HAH_1724 | HAH_0451 | Beta-lactamase domain protein. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family. | 0.454 |
HAH_1724 | ydiS | HAH_1724 | HAH_0849 | Beta-lactamase domain protein. | Flavoprotein. | 0.444 |
HAH_2570 | HAH_1724 | HAH_2570 | HAH_1724 | Beta-lactamase domain protein. | Beta-lactamase domain protein. | 0.481 |
HAH_2570 | truA | HAH_2570 | HAH_0451 | Beta-lactamase domain protein. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family. | 0.685 |
hlx4 | HAH_1724 | HAH_1725 | HAH_1724 | HoxA-like transcriptional regulator / response regulator receiver protein. | Beta-lactamase domain protein. | 0.577 |
noxA2 | HAH_1724 | HAH_0592 | HAH_1724 | NADH oxidase. | Beta-lactamase domain protein. | 0.570 |
truA | HAH_1724 | HAH_0451 | HAH_1724 | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family. | Beta-lactamase domain protein. | 0.454 |
truA | HAH_2570 | HAH_0451 | HAH_2570 | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family. | Beta-lactamase domain protein. | 0.685 |
ydiS | HAH_1724 | HAH_0849 | HAH_1724 | Flavoprotein. | Beta-lactamase domain protein. | 0.444 |