STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pknA2Serine/threonine-protein kinase PknA. (412 aa)    
Predicted Functional Partners:
HAH_1760
Protein phosphatase 2C-like phosphatase.
 
 0.999
gbp4
GTP-binding protein HSR1-related protein.
  
 0.998
nuoCD1
NADH dehydrogenase, subunit CD (ubiquinone).
  
 0.994
nuoCD2
NADH dehydrogenase, subunit CD (ubiquinone).
  
 0.994
rpl40e
50S ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.
   
 0.982
tpr
TPR repeat-containing protein.
  
 0.966
HAH_1762
Von Willebrand factor type A like metal binding protein.
 
 0.955
HAH_2021
Proteasome Rpn11 subunit JAMM motif protein.
  
 0.953
smc2
Chromosome segregation protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
 
 0.948
rad24
DNA repair protein.
  
 0.948
Your Current Organism:
Haloarcula hispanica
NCBI taxonomy Id: 634497
Other names: H. hispanica ATCC 33960, Haloarcula hispanica ATCC 33960, Haloarcula hispanica DSM 4426, Haloarcula hispanica JCM 8911, Haloarcula hispanica str. ATCC 33960, Haloarcula hispanica strain ATCC 33960
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.