Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HAH_0098 | HAH_2544 | HAH_0098 | HAH_2544 | Conserved hypothetical protein. | Methyltransferase type 11. | 0.517 |
HAH_0098 | HAH_4154 | HAH_0098 | HAH_4154 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.604 |
HAH_0098 | boa3 | HAH_0098 | HAH_0482 | Conserved hypothetical protein. | Bacterio-opsin activator-like protein. | 0.686 |
HAH_0098 | fixX | HAH_0098 | HAH_1918 | Conserved hypothetical protein. | Iron-sulfur binding protein, ferredoxin-like protein. | 0.501 |
HAH_0098 | torD | HAH_0098 | HAH_1917 | Conserved hypothetical protein. | Cytoplasmic chaperone TorD. | 0.615 |
HAH_1806 | torD | HAH_1806 | HAH_1917 | Cytoplasmic chaperone TorD family protein. | Cytoplasmic chaperone TorD. | 0.592 |
HAH_2544 | HAH_0098 | HAH_2544 | HAH_0098 | Methyltransferase type 11. | Conserved hypothetical protein. | 0.517 |
HAH_2544 | HAH_4154 | HAH_2544 | HAH_4154 | Methyltransferase type 11. | Conserved hypothetical protein. | 0.742 |
HAH_2544 | torD | HAH_2544 | HAH_1917 | Methyltransferase type 11. | Cytoplasmic chaperone TorD. | 0.489 |
HAH_4154 | HAH_0098 | HAH_4154 | HAH_0098 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.604 |
HAH_4154 | HAH_2544 | HAH_4154 | HAH_2544 | Conserved hypothetical protein. | Methyltransferase type 11. | 0.742 |
HAH_4154 | torD | HAH_4154 | HAH_1917 | Conserved hypothetical protein. | Cytoplasmic chaperone TorD. | 0.498 |
boa3 | HAH_0098 | HAH_0482 | HAH_0098 | Bacterio-opsin activator-like protein. | Conserved hypothetical protein. | 0.686 |
boa3 | fixX | HAH_0482 | HAH_1918 | Bacterio-opsin activator-like protein. | Iron-sulfur binding protein, ferredoxin-like protein. | 0.523 |
boa3 | torD | HAH_0482 | HAH_1917 | Bacterio-opsin activator-like protein. | Cytoplasmic chaperone TorD. | 0.570 |
fdhF | fdoH | HAH_1919 | HAH_1920 | Formate dehydrogenase alpha subunit. | Formate dehydrogenase, iron-sulfur subunit. | 0.999 |
fdhF | fixX | HAH_1919 | HAH_1918 | Formate dehydrogenase alpha subunit. | Iron-sulfur binding protein, ferredoxin-like protein. | 0.827 |
fdhF | torD | HAH_1919 | HAH_1917 | Formate dehydrogenase alpha subunit. | Cytoplasmic chaperone TorD. | 0.650 |
fdoH | fdhF | HAH_1920 | HAH_1919 | Formate dehydrogenase, iron-sulfur subunit. | Formate dehydrogenase alpha subunit. | 0.999 |
fdoH | fixX | HAH_1920 | HAH_1918 | Formate dehydrogenase, iron-sulfur subunit. | Iron-sulfur binding protein, ferredoxin-like protein. | 0.739 |
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