Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fbr1Putative cytochrome protein. (147 aa)    
Predicted Functional Partners:
nirK
Copper-containing dissimilatory nitrite reductase.
 
 
 
 0.793
dpm4
Dolichyl-phosphate-mannose-protein mannosyltransferase.
 
     0.597
purK
Phosphoribosylaminoimidazole carboxylase ATP binding subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).
       0.577
petB2
Cytochrome b6.
   
 
 0.553
coxC2
Cytochrome c oxidase subunit III.
     
 0.553
HAH_2024
PBS lyase HEAT domain protein repeat-containing protein.
 
     0.541
HAH_2405
DSBA-like thioredoxin domain-containing protein.
 
   
 0.537
tatC1
Sec-independent protein translocase component TatC1; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
  
   
 0.527
HAH_1378
Cytochrome b(C-terminal)/b6.
 
 
 
 0.527
hcp4
Halocyanin precursor-like protein.
  
     0.521
Your Current Organism:
Haloarcula hispanica
NCBI taxonomy Id: 634497
Other names: H. hispanica ATCC 33960, Haloarcula hispanica ATCC 33960, Haloarcula hispanica DSM 4426, Haloarcula hispanica JCM 8911, Haloarcula hispanica str. ATCC 33960, Haloarcula hispanica strain ATCC 33960
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