STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
idrIron-dependent repressor. (144 aa)    
Predicted Functional Partners:
HAH_2352
Conserved hypothetical protein.
       0.854
sufD
FeS assembly ATPase SufD.
     
 0.615
sufB
FeS assembly protein SufB.
     
 0.610
znuB
ABC transporter permease protein.
  
  
 0.540
sufC
FeS assembly ATPase SufC.
       0.520
znuC
Zinc uptake system ATP-binding protein ZurA.
  
  
 0.491
znuA
Adhesion lipoprotein / periplasmic solute binding protein.
  
  
 0.473
sodA
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
 
   
 0.465
sec11a
Signal sequence peptidase.
   
    0.410
sec11b
Signal sequence peptidase.
   
    0.410
Your Current Organism:
Haloarcula hispanica
NCBI taxonomy Id: 634497
Other names: H. hispanica ATCC 33960, Haloarcula hispanica ATCC 33960, Haloarcula hispanica DSM 4426, Haloarcula hispanica JCM 8911, Haloarcula hispanica str. ATCC 33960, Haloarcula hispanica strain ATCC 33960
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.