STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tasOxidoreductase. (343 aa)    
Predicted Functional Partners:
rpl37e
50S ribosomal protein L37e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL37 family.
    
 0.749
dsbB1
Disulfide bond formation protein DsbB.
       0.604
mocA
Aldo/keto reductase family oxidoreductase.
  
     0.534
HAH_2201
Aldo/keto reductase family oxidoreductase.
 
 
0.491
yafB1
Aldo/keto reductase family oxidoreductase.
 
 
0.490
yafB2
Aldo/keto reductase family oxidoreductase.
 
 
0.485
ppiB
Peptidyl-prolyl cis-trans isomerase.
    
   0.439
ark-4
Sensory transduction histidine kinase.
    
 0.428
HAH_2417
Conserved hypothetical protein.
       0.422
HAH_2849
Putative light and redox sensing histidine kinase.
   
  0.413
Your Current Organism:
Haloarcula hispanica
NCBI taxonomy Id: 634497
Other names: H. hispanica ATCC 33960, Haloarcula hispanica ATCC 33960, Haloarcula hispanica DSM 4426, Haloarcula hispanica JCM 8911, Haloarcula hispanica str. ATCC 33960, Haloarcula hispanica strain ATCC 33960
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