STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mru_0533Hypothetical protein; Belongs to the UPF0254 family. (202 aa)    
Predicted Functional Partners:
mru_0532
ThiF family protein.
     
 0.893
mru_0528
Hypothetical protein.
     
 0.760
bioB2
Biotin synthase BioB2.
     
 0.732
mru_0529
Hypothetical protein.
     
 0.722
mru_0530
Hypothetical protein.
     
 0.722
mru_0531
NIF3 family protein.
       0.624
mru_0525
Archaeal fibrillarin-like protein.
     
 0.511
hmd
Coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase Hmd; Catalyzes the reversible reduction of methenyl-H(4)MPT(+) to methylene-H(4)MPT.
     
 0.443
Your Current Organism:
Methanobrevibacter ruminantium
NCBI taxonomy Id: 634498
Other names: M. ruminantium M1, Methanobrevibacter ruminantium M1, Methanobrevibacter ruminantium str. M1, Methanobrevibacter ruminantium strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.