STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mru_1902Hypothetical protein. (395 aa)    
Predicted Functional Partners:
mru_1038
RNA methylase.
  
     0.710
phoU
Phosphate uptake regulator PhoU.
 
     0.681
arfB
Creatinine amidohydrolase ArfB; Catalyzes the hydrolysis of the formamide of 2-amino-5- formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy).
  
     0.666
mru_0845
Pyridoxal phosphate enzyme.
  
     0.664
mru_0249
Transcriptional regulator LysR family.
  
     0.646
mru_0391
Oligosaccharyl transferase.
  
     0.644
mru_1475
Hypothetical protein.
  
     0.610
mru_2028
Radical SAM domain-containing protein.
  
     0.608
fwdH
Tungsten formylmethanofuran dehydrogenase subunit H FwdH.
  
     0.603
mru_1213
Hypothetical protein.
  
     0.596
Your Current Organism:
Methanobrevibacter ruminantium
NCBI taxonomy Id: 634498
Other names: M. ruminantium M1, Methanobrevibacter ruminantium M1, Methanobrevibacter ruminantium str. M1, Methanobrevibacter ruminantium strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.