STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mvhD1Methyl viologen-reducing hydrogenase delta subunit MvhD1. (141 aa)    
Predicted Functional Partners:
hdrA
CoB--CoM heterodisulfide reductase subunit A HdrA; Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B).
 0.999
mvhA
Methyl viologen-reducing hydrogenase alpha subunit MvhA.
 
 0.999
mvhG
Methyl viologen-reducing hydrogenase gamma subunit MvhG.
 0.999
hdrB1
CoB--CoM heterodisulfide reductase subunit B HdrB1.
 
 0.997
hdrC
CoB--CoM heterodisulfide reductase subunit C HdrC.
 
 0.996
fdhB1
Formate dehydrogenase beta subunit FdhB1.
 0.993
fdhB2
Formate dehydrogenase beta chain FdhB2.
 
 0.993
mvhB
Methyl viologen-reducing hydrogenase beta subunit MvhB.
  
 
 0.965
fdhA2
Formate dehydrogenase alpha chain FdhA2.
  
 0.964
fdhA1
Formate dehydrogenase alpha subunit FdhA1.
  
 0.959
Your Current Organism:
Methanobrevibacter ruminantium
NCBI taxonomy Id: 634498
Other names: M. ruminantium M1, Methanobrevibacter ruminantium M1, Methanobrevibacter ruminantium str. M1, Methanobrevibacter ruminantium strain M1
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