Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ehbOEnergy-converting hydrogenase B subunit O EhbO. (332 aa)    
Predicted Functional Partners:
ehbL
Energy-converting hydrogenase B subunit L EhbL.
 
 
 0.997
ehbF
Energy-converting hydrogenase B subunit F EhbF.
 
 
 0.996
ehbM
Energy-converting hydrogenase B subunit M EhbM.
 
 
 0.995
ehbI
Energy-converting hydrogenase B subunit I EhbI.
 
   0.990
ehbK
Energy-converting hydrogenase B subunit K EhbK.
 
  
 0.983
ehbN
Energy-converting hydrogenase B subunit N EhbN.
 
 
 0.975
ehbA
Energy-converting hydrogenase B subunit A EhbA.
 
 
 
 0.968
ehaN
Energy-converting hydrogenase A subunit N EhaN.
 
 
 0.965
ehaO
Energy-converting hydrogenase A subunit O EhaO; Belongs to the complex I 49 kDa subunit family.
 
 
 0.945
ehaH
Energy-converting hydrogenase A subunit H EhaH.
  
  
 0.874
Your Current Organism:
Methanobrevibacter ruminantium
NCBI taxonomy Id: 634498
Other names: M. ruminantium M1, Methanobrevibacter ruminantium M1, Methanobrevibacter ruminantium str. M1, Methanobrevibacter ruminantium strain M1
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