Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
ehbLEnergy-converting hydrogenase B subunit L EhbL. (222 aa)    
Predicted Functional Partners:
ehbO
Energy-converting hydrogenase B subunit O EhbO.
 
 
 0.997
ehbK
Energy-converting hydrogenase B subunit K EhbK.
 
  
 0.996
ehbI
Energy-converting hydrogenase B subunit I EhbI.
 
 
 0.993
ehbM
Energy-converting hydrogenase B subunit M EhbM.
 
 
 0.991
ehbF
Energy-converting hydrogenase B subunit F EhbF.
 
 
 0.977
ehbH
Energy-converting hydrogenase B subunit H EhbH.
  
 
 0.966
ehbG
Energy-converting hydrogenase B subunit G EhbG.
  
    0.963
sdhA
Succinate dehydrogenase/fumarate reductase flavoprotein subunit SdhA.
  
 
 0.958
ehbE
Energy-converting hydrogenase B subunit E EhbE.
 
 
 0.955
ehbA
Energy-converting hydrogenase B subunit A EhbA.
 
 
 
 0.947
Your Current Organism:
Methanobrevibacter ruminantium
NCBI taxonomy Id: 634498
Other names: M. ruminantium M1, Methanobrevibacter ruminantium M1, Methanobrevibacter ruminantium str. M1, Methanobrevibacter ruminantium strain M1
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