STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EbC_04170Conserved uncharacterized protein; silverDB:661Eb00551. (1135 aa)    
Predicted Functional Partners:
EbC_04180
Conserved uncharacterized protein; silverDB:661Eb00553.
 
  
 0.951
EbC_04190
Conserved uncharacterized protein; silverDB:661Eb00554.
 
  
 0.926
EbC_04210
Type VI secretion system family protein, lipoprotein VCA0113; silverDB:661Eb00556.
 
  
 0.926
EbC_04200
Conserved uncharacterized protein; silverDB:661Eb00555.
 
  
 0.925
EbC_18400
Type VI secretion system family protein, IcmF; silverDB:661Eb02483.
 
  
  0.924
EbC_39390
Putative Type VI secretion system, ImcF domain-containing protein; silverDB:661Eb05152.
  
  
 
0.919
EbC_05800
Type VI secretion system, IcmF; silverDB:661Eb00773.
  
  
 
0.909
EbC_04220
Type VI secretion system, lysozyme-related family protein; silverDB:661Eb00557.
 
  
 0.907
EbC_39330
Putative Type VI secretion system, Rhs element Vgr protein; silverDB:661Eb05146.
 
  
 0.867
EbC_04230
ImpA domain protein; silverDB:661Eb00558.
 
  
 0.861
Your Current Organism:
Erwinia billingiae
NCBI taxonomy Id: 634500
Other names: E. billingiae Eb661, Erwinia billingiae Eb661, Erwinia billingiae str. Eb661, Erwinia billingiae strain Eb661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.