STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EbC_08550Amidase; silverDB:661Eb01159. (466 aa)    
Predicted Functional Partners:
ggt
Gamma-glutamyltranspeptidase; silverDB:661Eb01161.
  
 
  0.990
EbC_08540
Conserved uncharacterized protein; silverDB:661Eb01157.
 
    0.969
pucG
Purine catabolism protein; silverDB:661Eb01170.
 
  0.944
EbC_08560
Conserved uncharacterized protein; silverDB:661Eb01160.
       0.908
EbC_06390
Urea amidolyase, Yeast-like; silverDB:661Eb00866.
    
 0.627
aspS
Aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
 
 
 0.623
EbC_08580
Transcriptional regulator; silverDB:661Eb01162.
 
     0.591
fruK
1-phosphofructokinase; silverDB:661Eb03972; Belongs to the carbohydrate kinase PfkB family.
   
    0.524
asnS
Asparaginyl-tRNA synthetase; silverDB:661Eb02043.
   
 
 0.484
EbC_40470
Glutamate synthase, large subunit; silverDB:661Eb05304.
     
 0.473
Your Current Organism:
Erwinia billingiae
NCBI taxonomy Id: 634500
Other names: E. billingiae Eb661, Erwinia billingiae Eb661, Erwinia billingiae str. Eb661, Erwinia billingiae strain Eb661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.