Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EbC_11630 | EbC_11920 | EbC_11630 | EbC_11920 | Uncharacterized protein; silverDB:661Eb01562. | Chemotaxis signal transduction protein; silverDB:661Eb01608. | 0.884 |
EbC_11630 | EbC_13510 | EbC_11630 | EbC_13510 | Uncharacterized protein; silverDB:661Eb01562. | Methyl-accepting chemotaxis protein; silverDB:661Eb01821. | 0.480 |
EbC_11630 | EbC_18030 | EbC_11630 | EbC_18030 | Uncharacterized protein; silverDB:661Eb01562. | Sensor protein; silverDB:661Eb02425. | 0.988 |
EbC_11630 | EbC_18050 | EbC_11630 | EbC_18050 | Uncharacterized protein; silverDB:661Eb01562. | Sensor hybrid histidine kinase; silverDB:661Eb02427. | 0.941 |
EbC_11630 | arcB | EbC_11630 | EbC_40450 | Uncharacterized protein; silverDB:661Eb01562. | Aerobic respiration control sensor protein; silverDB:661Eb05300. | 0.990 |
EbC_11630 | cheA | EbC_11630 | EbC_25380 | Uncharacterized protein; silverDB:661Eb01562. | Chemotaxis protein; silverDB:661Eb03386. | 0.500 |
EbC_11630 | cheB | EbC_11630 | EbC_25320 | Uncharacterized protein; silverDB:661Eb01562. | Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.572 |
EbC_11630 | cheW | EbC_11630 | EbC_25370 | Uncharacterized protein; silverDB:661Eb01562. | Chemotaxis protein; silverDB:661Eb03384. | 0.545 |
EbC_11630 | cheY | EbC_11630 | EbC_25310 | Uncharacterized protein; silverDB:661Eb01562. | Chemotaxis regulator, flagellar motor switch components; silverDB:661Eb03376. | 0.442 |
EbC_11920 | EbC_11630 | EbC_11920 | EbC_11630 | Chemotaxis signal transduction protein; silverDB:661Eb01608. | Uncharacterized protein; silverDB:661Eb01562. | 0.884 |
EbC_11920 | EbC_13510 | EbC_11920 | EbC_13510 | Chemotaxis signal transduction protein; silverDB:661Eb01608. | Methyl-accepting chemotaxis protein; silverDB:661Eb01821. | 0.959 |
EbC_11920 | EbC_18030 | EbC_11920 | EbC_18030 | Chemotaxis signal transduction protein; silverDB:661Eb01608. | Sensor protein; silverDB:661Eb02425. | 0.995 |
EbC_11920 | EbC_18050 | EbC_11920 | EbC_18050 | Chemotaxis signal transduction protein; silverDB:661Eb01608. | Sensor hybrid histidine kinase; silverDB:661Eb02427. | 0.987 |
EbC_11920 | arcB | EbC_11920 | EbC_40450 | Chemotaxis signal transduction protein; silverDB:661Eb01608. | Aerobic respiration control sensor protein; silverDB:661Eb05300. | 0.998 |
EbC_11920 | cheA | EbC_11920 | EbC_25380 | Chemotaxis signal transduction protein; silverDB:661Eb01608. | Chemotaxis protein; silverDB:661Eb03386. | 0.999 |
EbC_11920 | cheB | EbC_11920 | EbC_25320 | Chemotaxis signal transduction protein; silverDB:661Eb01608. | Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.974 |
EbC_11920 | cheR | EbC_11920 | EbC_25330 | Chemotaxis signal transduction protein; silverDB:661Eb01608. | Chemotaxis protein methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.924 |
EbC_11920 | cheW | EbC_11920 | EbC_25370 | Chemotaxis signal transduction protein; silverDB:661Eb01608. | Chemotaxis protein; silverDB:661Eb03384. | 0.921 |
EbC_11920 | cheY | EbC_11920 | EbC_25310 | Chemotaxis signal transduction protein; silverDB:661Eb01608. | Chemotaxis regulator, flagellar motor switch components; silverDB:661Eb03376. | 0.616 |
EbC_13510 | EbC_11630 | EbC_13510 | EbC_11630 | Methyl-accepting chemotaxis protein; silverDB:661Eb01821. | Uncharacterized protein; silverDB:661Eb01562. | 0.480 |
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