STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trp1400BIS1400 transposase B, probable fragment; silverDB:661Eb03576. (91 aa)    
Predicted Functional Partners:
trp1400B-2
IS1400 transposase B, probable fragment; silverDB:661Eb03578.
     0.975
trp1400A
IS1400 transposase A; silverDB:661Eb03574.
 
  
 0.870
trp1400A-2
IS1400 transposase A; silverDB:661Eb04843.
 
  
 0.791
EbC_03480
Transposase (IS3/IS911 family), fragment; silverDB:661Eb00456.
 
  
 0.762
Your Current Organism:
Erwinia billingiae
NCBI taxonomy Id: 634500
Other names: E. billingiae Eb661, Erwinia billingiae Eb661, Erwinia billingiae str. Eb661, Erwinia billingiae strain Eb661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.