STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EbC_32020Repressor protein cI; silverDB:661Eb04221. (232 aa)    
Predicted Functional Partners:
recA
Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
 
 0.783
EbC_31980
Phage replication protein O; silverDB:661Eb04216.
 
     0.642
EbC_32030
Uncharacterized protein; silverDB:cbdbB37.
       0.586
EbC_32010
Phage Cro protein; silverDB:661Eb04220.
       0.574
EbC_31930
Phage NinG protein; silverDB:661Eb04211.
  
     0.488
EbC_37340
Putative autotransporter/pertactin; silverDB:661Eb04882.
  
     0.484
EbC_05990
RHS family protein; silverDB:661Eb00804.
  
     0.465
EbC_04180
Conserved uncharacterized protein; silverDB:661Eb00553.
  
     0.462
recN
Recombination and DNA repair protein; May be involved in recombinational repair of damaged DNA.
   
  
 0.460
EbC_18050
Sensor hybrid histidine kinase; silverDB:661Eb02427.
 
   
 0.447
Your Current Organism:
Erwinia billingiae
NCBI taxonomy Id: 634500
Other names: E. billingiae Eb661, Erwinia billingiae Eb661, Erwinia billingiae str. Eb661, Erwinia billingiae strain Eb661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.