STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bgr_00140Hypothetical protein. (214 aa)    
Predicted Functional Partners:
Bgr_00120
Hypothetical membrane protein.
 
     0.824
lptD
Organic solvent tolerance protein OstA; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
 
   
 0.772
Bgr_00150
OstA family protein.
 
   
 0.769
cycH
Cytochrome c-type biogenesis protein CycH.
  
     0.761
Bgr_16380
Outer membrane protein, porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
     0.748
Bgr_03870
Putative transmembrane protein.
  
     0.747
hbpB
Hemin binding protein B; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
     0.741
hbpA1
Hemin binding protein A.
  
     0.740
hbpC1
Hemin binding protein C.
  
     0.731
hbpA2
Hemin binding protein A.
  
     0.731
Your Current Organism:
Bartonella grahamii
NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.