addB protein (Bartonella grahamii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

addB

Double-strand break repair protein AddB. (1039 aa)

Predicted Functional Partners:

addA

0.958

Bgr_19010

0.802

Bgr_19830

0.775

Bgr_13790

0.692

Bgr_01020

0.690

uvrD

0.690

Bgr_19690

0.642

Bgr_06290

0.634

Bgr_00180

0.625

Bgr_11420

0.619

Your Current Organism:

Bartonella grahamii

NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Bgr_00180	Bgr_01020	Bgr_00180	Bgr_01020	Hypothetical protein.	Putative translocase transmembrane protein.	0.585
Bgr_00180	Bgr_19010	Bgr_00180	Bgr_19010	Hypothetical protein.	Outer membrane lipoprotein carrier protein, LolA family; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	0.531
Bgr_00180	Bgr_19690	Bgr_00180	Bgr_19690	Hypothetical protein.	Hypothetical DNA-binding protein.	0.718
Bgr_00180	Bgr_19830	Bgr_00180	Bgr_19830	Hypothetical protein.	Putative DNA polymerase III subunit delta.	0.597
Bgr_00180	addB	Bgr_00180	Bgr_00250	Hypothetical protein.	Double-strand break repair protein AddB.	0.625
Bgr_01020	Bgr_00180	Bgr_01020	Bgr_00180	Putative translocase transmembrane protein.	Hypothetical protein.	0.585
Bgr_01020	Bgr_19010	Bgr_01020	Bgr_19010	Putative translocase transmembrane protein.	Outer membrane lipoprotein carrier protein, LolA family; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	0.569
Bgr_01020	Bgr_19690	Bgr_01020	Bgr_19690	Putative translocase transmembrane protein.	Hypothetical DNA-binding protein.	0.627
Bgr_01020	Bgr_19830	Bgr_01020	Bgr_19830	Putative translocase transmembrane protein.	Putative DNA polymerase III subunit delta.	0.680
Bgr_01020	addA	Bgr_01020	Bgr_00260	Putative translocase transmembrane protein.	Double-strand break repair helicase AddA; Belongs to the helicase family. UvrD subfamily.	0.450
Bgr_01020	addB	Bgr_01020	Bgr_00250	Putative translocase transmembrane protein.	Double-strand break repair protein AddB.	0.690
Bgr_06290	Bgr_11420	Bgr_06290	Bgr_11420	DNA polymerase III subunit chi.	Hypothetical protein.	0.602
Bgr_06290	Bgr_13790	Bgr_06290	Bgr_13790	DNA polymerase III subunit chi.	Hypothetical protein.	0.586
Bgr_06290	Bgr_19010	Bgr_06290	Bgr_19010	DNA polymerase III subunit chi.	Outer membrane lipoprotein carrier protein, LolA family; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	0.508
Bgr_06290	Bgr_19830	Bgr_06290	Bgr_19830	DNA polymerase III subunit chi.	Putative DNA polymerase III subunit delta.	0.989
Bgr_06290	addA	Bgr_06290	Bgr_00260	DNA polymerase III subunit chi.	Double-strand break repair helicase AddA; Belongs to the helicase family. UvrD subfamily.	0.667
Bgr_06290	addB	Bgr_06290	Bgr_00250	DNA polymerase III subunit chi.	Double-strand break repair protein AddB.	0.634
Bgr_11420	Bgr_06290	Bgr_11420	Bgr_06290	Hypothetical protein.	DNA polymerase III subunit chi.	0.602
Bgr_11420	Bgr_19830	Bgr_11420	Bgr_19830	Hypothetical protein.	Putative DNA polymerase III subunit delta.	0.760
Bgr_11420	addB	Bgr_11420	Bgr_00250	Hypothetical protein.	Double-strand break repair protein AddB.	0.619