STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bgr_01020Putative translocase transmembrane protein. (230 aa)    
Predicted Functional Partners:
addB
Double-strand break repair protein AddB.
  
     0.690
Bgr_19830
Putative DNA polymerase III subunit delta.
 
     0.680
Bgr_18210
Hypothetical protein.
  
     0.674
Bgr_01030
Smr family protein.
       0.630
Bgr_19690
Hypothetical DNA-binding protein.
  
     0.627
Bgr_11850
NADH-ubiquinone oxidoreductase.
  
     0.602
Bgr_00180
Hypothetical protein.
  
     0.585
Bgr_19010
Outer membrane lipoprotein carrier protein, LolA family; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
     0.569
Bgr_19580
Hypothetical protein.
  
     0.545
Bgr_01010
FxsA cytoplasmic membrane protein.
       0.539
Your Current Organism:
Bartonella grahamii
NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup
Server load: low (28%) [HD]