STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bgr_03400Phage related protein, virulence-associated. (1047 aa)    
Predicted Functional Partners:
gpJ1
Phage baseplate assembly protein GpJ1.
 
     0.926
gpV1
Phage baseplate assembly protein V1.
 
     0.843
gpW1
Phage baseplate assembly protein GpW1.
 
     0.839
Bgr_03390
Phage tail collar protein.
 
     0.784
Bgr_03410
Phage protein.
       0.784
Bgr_03450
Hypothetical protein.
       0.773
gpJ2
Phage baseplate assembly protein GpJ2.
 
     0.695
Bgr_03460
Hypothetical protein.
       0.553
Bgr_03470
Hypothetical protein.
       0.553
Bgr_03480
HicB family protein.
       0.469
Your Current Organism:
Bartonella grahamii
NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.