gpJ1 protein (Bartonella grahamii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

gpJ1

Phage baseplate assembly protein GpJ1. (275 aa)

Predicted Functional Partners:

gpW1

0.989

gpV1

0.981

gpX1

0.964

Bgr_03410

0.964

gpX2

0.964

gpFII

0.962

gpFII-2

0.962

gpFI

0.955

gpFI-2

0.955

gpW2

0.955

Your Current Organism:

Bartonella grahamii

NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Bgr_03410	gpFI	Bgr_03410	Bgr_03370	Phage protein.	Phage tail sheath protein FI.	0.778
Bgr_03410	gpFI-2	Bgr_03410	Bgr_08800	Phage protein.	Phage tail sheath protein FI.	0.778
Bgr_03410	gpFII	Bgr_03410	Bgr_03360	Phage protein.	Phage tail tube protein FII.	0.808
Bgr_03410	gpFII-2	Bgr_03410	Bgr_08790	Phage protein.	Phage tail tube protein FII.	0.808
Bgr_03410	gpJ1	Bgr_03410	Bgr_03420	Phage protein.	Phage baseplate assembly protein GpJ1.	0.964
Bgr_03410	gpV1	Bgr_03410	Bgr_03440	Phage protein.	Phage baseplate assembly protein V1.	0.916
Bgr_03410	gpW1	Bgr_03410	Bgr_03430	Phage protein.	Phage baseplate assembly protein GpW1.	0.957
Bgr_03410	gpW2	Bgr_03410	Bgr_08910	Phage protein.	Phage baseplate assembly protein GpW2.	0.819
Bgr_03410	gpX1	Bgr_03410	Bgr_03320	Phage protein.	Phage tail protein X1.	0.765
Bgr_03410	gpX2	Bgr_03410	Bgr_08750	Phage protein.	Phage tail protein X2.	0.765
gpFI	Bgr_03410	Bgr_03370	Bgr_03410	Phage tail sheath protein FI.	Phage protein.	0.778
gpFI	gpFII	Bgr_03370	Bgr_03360	Phage tail sheath protein FI.	Phage tail tube protein FII.	0.991
gpFI	gpFII-2	Bgr_03370	Bgr_08790	Phage tail sheath protein FI.	Phage tail tube protein FII.	0.964
gpFI	gpJ1	Bgr_03370	Bgr_03420	Phage tail sheath protein FI.	Phage baseplate assembly protein GpJ1.	0.955
gpFI	gpV1	Bgr_03370	Bgr_03440	Phage tail sheath protein FI.	Phage baseplate assembly protein V1.	0.940
gpFI	gpW1	Bgr_03370	Bgr_03430	Phage tail sheath protein FI.	Phage baseplate assembly protein GpW1.	0.960
gpFI	gpW2	Bgr_03370	Bgr_08910	Phage tail sheath protein FI.	Phage baseplate assembly protein GpW2.	0.960
gpFI	gpX1	Bgr_03370	Bgr_03320	Phage tail sheath protein FI.	Phage tail protein X1.	0.978
gpFI	gpX2	Bgr_03370	Bgr_08750	Phage tail sheath protein FI.	Phage tail protein X2.	0.956
gpFI-2	Bgr_03410	Bgr_08800	Bgr_03410	Phage tail sheath protein FI.	Phage protein.	0.778