STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bgr_03560Phage portal protein. (514 aa)    
Predicted Functional Partners:
gpA1
Phage terminase large subunit GpA1.
 
  
 0.955
Bgr_03590
Phage protein.
 
     0.938
gp18
Phage protein Gp18.
 
    0.901
gp20
Phage protein Gp20.
 
     0.867
gp19
Phage protein Gp19.
 
     0.866
gpA2
Phage terminase large subunit GpA2.
 
  
 0.811
gp20-2
Phage protein Gp20.
 
     0.782
Bgr_03570
Putative phage related protein.
       0.778
gp19-2
Phage protein Gp19.
 
     0.776
Bgr_09220
Phage related protein.
  
     0.760
Your Current Organism:
Bartonella grahamii
NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.