STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bgr_05020Toxin secretion protein, HlyB family. (570 aa)    
Predicted Functional Partners:
Bgr_18480
ABC transporter, ATP-binding protein (fragment).
 
   0.929
vceA
Multidrug resistance protein VceA.
  
 
 0.826
Bgr_18790
Secretion protein, HlyD family.
  
 
 0.826
tpxA
Beta-1,2-glucan export ATP-binding component of ABC transporter; Involved in Beta-(1-->2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
 
 
  
0.799
msbA
ABC transporter, ATP-binding protein.
 
 
  
0.795
Bgr_18450
ABC transporter, ATP-binding protein.
 
 
  
0.793
tolC
Type I secretion outer membrane protein TolC.
  
  
 0.782
Bgr_18190
Tol-Pal system protein YbgF.
  
  
 0.772
metN
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
    
0.642
Bgr_04780
Sensor diguanylate cyclase/phosphodiesterase.
     
 0.542
Your Current Organism:
Bartonella grahamii
NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.