STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bgr_05660Phage SPO1 DNA polymerase-related protein. (276 aa)    
Predicted Functional Partners:
Bgr_05850
uracil-DNA glycosylase family protein.
     
 0.909
filA
filament-A percursor.
   
   0.612
pepN
Aminopeptidase N.
       0.577
gpmA
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
   
    0.566
ssb1
Single-strand binding protein.
    
   0.510
Bgr_07790
Single-strand binding protein (fragment).
    
   0.510
ssb2
Single-strand binding protein.
    
   0.510
ssb3
Single-strand binding protein.
    
   0.510
ssb4
Single-strand binding protein.
    
   0.510
Bgr_02380
Glycoprotease family protein.
  
    0.487
Your Current Organism:
Bartonella grahamii
NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.