STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dinJ1DNA-damage-inducible protein J. (90 aa)    
Predicted Functional Partners:
Bgr_10260
Addiction module toxin, RelE/StbE family.
 
 
 0.917
dinJ2
DNA-damage-inducible protein J.
  
     0.774
Bgr_10020
Addiction module toxin, RelE/StbE family.
  
 
 0.706
Bgr_09120
Hypothetical protein.
  
     0.558
yacB1
YacB protein.
   
   0.551
yacB2
YacB protein.
   
   0.551
Bgr_03670
Putative transcriptional regulator.
  
     0.513
Your Current Organism:
Bartonella grahamii
NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.