gpD3 protein (Bartonella grahamii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

gpD3

Phage late control protein D3. (343 aa)

Predicted Functional Partners:

gpU3

0.973

gpW1

0.953

gpW2

0.953

gpW3

0.953

gpFI

0.946

gpFI-2

0.946

gpFI-3

0.946

gpX1

0.907

gpJ1

0.907

gpX2

0.907

Your Current Organism:

Bartonella grahamii

NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
gpD3	gpFI	Bgr_09770	Bgr_03370	Phage late control protein D3.	Phage tail sheath protein FI.	0.946
gpD3	gpFI-2	Bgr_09770	Bgr_08800	Phage late control protein D3.	Phage tail sheath protein FI.	0.946
gpD3	gpFI-3	Bgr_09770	Bgr_16220	Phage late control protein D3.	Phage tail sheath protein FI.	0.946
gpD3	gpJ1	Bgr_09770	Bgr_03420	Phage late control protein D3.	Phage baseplate assembly protein GpJ1.	0.907
gpD3	gpU3	Bgr_09770	Bgr_09750	Phage late control protein D3.	Phage tail protein U3.	0.973
gpD3	gpW1	Bgr_09770	Bgr_03430	Phage late control protein D3.	Phage baseplate assembly protein GpW1.	0.953
gpD3	gpW2	Bgr_09770	Bgr_08910	Phage late control protein D3.	Phage baseplate assembly protein GpW2.	0.953
gpD3	gpW3	Bgr_09770	Bgr_16280	Phage late control protein D3.	Phage baseplate assembly protein gpW3.	0.953
gpD3	gpX1	Bgr_09770	Bgr_03320	Phage late control protein D3.	Phage tail protein X1.	0.907
gpD3	gpX2	Bgr_09770	Bgr_08750	Phage late control protein D3.	Phage tail protein X2.	0.907
gpFI	gpD3	Bgr_03370	Bgr_09770	Phage tail sheath protein FI.	Phage late control protein D3.	0.946
gpFI	gpJ1	Bgr_03370	Bgr_03420	Phage tail sheath protein FI.	Phage baseplate assembly protein GpJ1.	0.955
gpFI	gpU3	Bgr_03370	Bgr_09750	Phage tail sheath protein FI.	Phage tail protein U3.	0.934
gpFI	gpW1	Bgr_03370	Bgr_03430	Phage tail sheath protein FI.	Phage baseplate assembly protein GpW1.	0.960
gpFI	gpW2	Bgr_03370	Bgr_08910	Phage tail sheath protein FI.	Phage baseplate assembly protein GpW2.	0.960
gpFI	gpW3	Bgr_03370	Bgr_16280	Phage tail sheath protein FI.	Phage baseplate assembly protein gpW3.	0.960
gpFI	gpX1	Bgr_03370	Bgr_03320	Phage tail sheath protein FI.	Phage tail protein X1.	0.978
gpFI	gpX2	Bgr_03370	Bgr_08750	Phage tail sheath protein FI.	Phage tail protein X2.	0.956
gpFI-2	gpD3	Bgr_08800	Bgr_09770	Phage tail sheath protein FI.	Phage late control protein D3.	0.946
gpFI-2	gpJ1	Bgr_08800	Bgr_03420	Phage tail sheath protein FI.	Phage baseplate assembly protein GpJ1.	0.955