STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bgr_09810Phage-related integrase/recombinase; Belongs to the 'phage' integrase family. (345 aa)    
Predicted Functional Partners:
Bgr_09820
Hypothetical protein.
       0.773
comF
Competence protein ComF.
   
    0.599
Bgr_09880
Putative phage recombination protein.
 
     0.577
Bgr_09930
Phage related protein.
 
     0.576
Bgr_09840
Phage related protein.
     
 0.575
tyrC
Cyclohexadienyl dehydrogenase.
  
    0.574
Bgr_09290
Putative phage recombination protein.
  
     0.565
Bgr_09830
Phage related protein.
       0.565
Bgr_03810
Phage related protein.
  
     0.564
mccC
MccC protein.
  
     0.552
Your Current Organism:
Bartonella grahamii
NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.