STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
exo4Phage-related exonuclease. (207 aa)    
Predicted Functional Partners:
bet
Bacteriophage recombination protein.
 
 
   0.783
Bgr_09880
Putative phage recombination protein.
 
     0.689
gpX1
Phage tail protein X1.
   
    0.640
gpX2
Phage tail protein X2.
   
    0.640
Bgr_09850
Hypothetical protein.
       0.580
gpU1
Phage tail protein U1.
   
    0.573
gpU2
Phage tail protein U2.
   
    0.573
gpU3
Phage tail protein U3.
   
    0.573
gpU4
Phage tail protein U4.
   
    0.573
gpU5
Phage tail protein U5.
   
    0.573
Your Current Organism:
Bartonella grahamii
NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.