Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Bgr_00340 | Bgr_11170 | Bgr_00340 | Bgr_11170 | Hypothetical transmembrane protein. | Major facilitator family transporter. | 0.533 |
| Bgr_04200 | Bgr_11170 | Bgr_04200 | Bgr_11170 | Oxidoreductase. | Major facilitator family transporter. | 0.494 |
| Bgr_11170 | Bgr_00340 | Bgr_11170 | Bgr_00340 | Major facilitator family transporter. | Hypothetical transmembrane protein. | 0.533 |
| Bgr_11170 | Bgr_04200 | Bgr_11170 | Bgr_04200 | Major facilitator family transporter. | Oxidoreductase. | 0.494 |
| Bgr_11170 | Bgr_18790 | Bgr_11170 | Bgr_18790 | Major facilitator family transporter. | Secretion protein, HlyD family. | 0.407 |
| Bgr_11170 | rpmG | Bgr_11170 | Bgr_11180 | Major facilitator family transporter. | 50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. | 0.537 |
| Bgr_11170 | topA | Bgr_11170 | Bgr_11150 | Major facilitator family transporter. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.434 |
| Bgr_11170 | vacB | Bgr_11170 | Bgr_11160 | Major facilitator family transporter. | Exoribonuclease; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.434 |
| Bgr_11170 | vceA | Bgr_11170 | Bgr_15530 | Major facilitator family transporter. | Multidrug resistance protein VceA. | 0.407 |
| Bgr_18790 | Bgr_11170 | Bgr_18790 | Bgr_11170 | Secretion protein, HlyD family. | Major facilitator family transporter. | 0.407 |
| rpmG | Bgr_11170 | Bgr_11180 | Bgr_11170 | 50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. | Major facilitator family transporter. | 0.537 |
| rpmG | topA | Bgr_11180 | Bgr_11150 | 50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.405 |
| topA | Bgr_11170 | Bgr_11150 | Bgr_11170 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | Major facilitator family transporter. | 0.434 |
| topA | rpmG | Bgr_11150 | Bgr_11180 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. | 0.405 |
| topA | vacB | Bgr_11150 | Bgr_11160 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | Exoribonuclease; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.810 |
| vacB | Bgr_11170 | Bgr_11160 | Bgr_11170 | Exoribonuclease; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | Major facilitator family transporter. | 0.434 |
| vacB | topA | Bgr_11160 | Bgr_11150 | Exoribonuclease; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.810 |
| vceA | Bgr_11170 | Bgr_15530 | Bgr_11170 | Multidrug resistance protein VceA. | Major facilitator family transporter. | 0.407 |