STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bgr_11340Nitrogen-fixing NifU-like protein. (142 aa)    
Predicted Functional Partners:
nifS1
Nitrogenase cofactor synthesis protein NifS1.
  
 0.999
nifS2
Nitrogenase cofactor synthesis protein NifS2; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.993
dnaK
Heat shock protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.943
sufC
FeS assembly ATPase SufC.
 
  
 0.919
Bgr_11630
Putative FeS assembly scaffold SufA; Belongs to the HesB/IscA family.
  
  
 0.886
Bgr_12190
Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
  
  
 0.822
nifU
Nitrogen fixation protein.
  
 
 0.794
Bgr_11350
Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
       0.786
mrp
Mrp protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
  
 0.781
Bgr_06660
Iron-responsive transcriptional regulator.
  
  
 0.773
Your Current Organism:
Bartonella grahamii
NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.