STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bgr_11630Putative FeS assembly scaffold SufA; Belongs to the HesB/IscA family. (121 aa)    
Predicted Functional Partners:
Bgr_11340
Nitrogen-fixing NifU-like protein.
  
  
 0.886
sufB
FeS assembly protein SufB.
  
 
 0.872
nifS1
Nitrogenase cofactor synthesis protein NifS1.
 
  
 0.837
sufC
FeS assembly ATPase SufC.
  
 
 0.798
nifU
Nitrogen fixation protein.
 
 
 0.798
sufD
FeS assembly protein SufD.
  
 
 0.754
dnaK
Heat shock protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 
 0.727
Bgr_12030
Glutaredoxin-like protein; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 0.720
Bgr_05990
Aminomethyltransferase.
 
 
 0.683
nifS2
Nitrogenase cofactor synthesis protein NifS2; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.519
Your Current Organism:
Bartonella grahamii
NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.