dnaE protein (Bartonella grahamii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

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Coexpression

Experiments

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[Homology]

Score

dnaE

DNA polymerase III subunit alpha. (1164 aa)

Predicted Functional Partners:

dnaQ

0.995

dnaN

0.995

dnaX

0.995

dnaC

0.995

Bgr_19830

0.995

Bgr_06290

0.993

ssb1

0.721

Bgr_07790

0.721

ssb2

0.721

ssb3

0.721

Your Current Organism:

Bartonella grahamii

NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Bgr_06290	Bgr_07790	Bgr_06290	Bgr_07790	DNA polymerase III subunit chi.	Single-strand binding protein (fragment).	0.699
Bgr_06290	Bgr_19830	Bgr_06290	Bgr_19830	DNA polymerase III subunit chi.	Putative DNA polymerase III subunit delta.	0.989
Bgr_06290	dnaC	Bgr_06290	Bgr_10820	DNA polymerase III subunit chi.	DNA polymerase III subunit delta'.	0.994
Bgr_06290	dnaE	Bgr_06290	Bgr_12130	DNA polymerase III subunit chi.	DNA polymerase III subunit alpha.	0.993
Bgr_06290	dnaN	Bgr_06290	Bgr_01170	DNA polymerase III subunit chi.	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.975
Bgr_06290	dnaQ	Bgr_06290	Bgr_00050	DNA polymerase III subunit chi.	DNA polymerase III epsilon chain; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.	0.945
Bgr_06290	dnaX	Bgr_06290	Bgr_02420	DNA polymerase III subunit chi.	DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.993
Bgr_06290	ssb1	Bgr_06290	Bgr_03650	DNA polymerase III subunit chi.	Single-strand binding protein.	0.699
Bgr_06290	ssb2	Bgr_06290	Bgr_09140	DNA polymerase III subunit chi.	Single-strand binding protein.	0.699
Bgr_06290	ssb3	Bgr_06290	Bgr_09990	DNA polymerase III subunit chi.	Single-strand binding protein.	0.699
Bgr_07790	Bgr_06290	Bgr_07790	Bgr_06290	Single-strand binding protein (fragment).	DNA polymerase III subunit chi.	0.699
Bgr_07790	dnaE	Bgr_07790	Bgr_12130	Single-strand binding protein (fragment).	DNA polymerase III subunit alpha.	0.721
Bgr_07790	dnaX	Bgr_07790	Bgr_02420	Single-strand binding protein (fragment).	DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.719
Bgr_19830	Bgr_06290	Bgr_19830	Bgr_06290	Putative DNA polymerase III subunit delta.	DNA polymerase III subunit chi.	0.989
Bgr_19830	dnaC	Bgr_19830	Bgr_10820	Putative DNA polymerase III subunit delta.	DNA polymerase III subunit delta'.	0.996
Bgr_19830	dnaE	Bgr_19830	Bgr_12130	Putative DNA polymerase III subunit delta.	DNA polymerase III subunit alpha.	0.995
Bgr_19830	dnaN	Bgr_19830	Bgr_01170	Putative DNA polymerase III subunit delta.	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.995
Bgr_19830	dnaQ	Bgr_19830	Bgr_00050	Putative DNA polymerase III subunit delta.	DNA polymerase III epsilon chain; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.	0.966
Bgr_19830	dnaX	Bgr_19830	Bgr_02420	Putative DNA polymerase III subunit delta.	DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.995
dnaC	Bgr_06290	Bgr_10820	Bgr_06290	DNA polymerase III subunit delta'.	DNA polymerase III subunit chi.	0.994