STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bgr_12190Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family. (107 aa)    
Predicted Functional Partners:
Bgr_11340
Nitrogen-fixing NifU-like protein.
  
  
 0.822
nifU
Nitrogen fixation protein.
 
 
 0.782
nifS1
Nitrogenase cofactor synthesis protein NifS1.
 
  
 0.743
Bgr_12030
Glutaredoxin-like protein; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 0.700
Bgr_05990
Aminomethyltransferase.
 
 
 0.672
Bgr_12180
Hypothetical protein.
       0.665
dnaK
Heat shock protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 
 0.615
dgt
Deoxyguanosinetriphosphate triphosphohydrolase; Belongs to the dGTPase family. Type 2 subfamily.
     
 0.614
sufD
FeS assembly protein SufD.
  
 
 0.600
sufB
FeS assembly protein SufB.
  
 
 0.596
Your Current Organism:
Bartonella grahamii
NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.