STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bgr_14110Transcriptional regulator, ArsR family. (312 aa)    
Predicted Functional Partners:
Bgr_04960
Transcriptional regulator, Ros/MucR family.
  
   
 0.648
trxA
Thioredoxin; Belongs to the thioredoxin family.
   
 
 0.591
ribD
Riboflavin biosynthesis protein ribD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
  
 0.583
Bgr_06070
Oxidoreductase, short-chain dehydrogenase/reductase family.
 
 
 
 0.563
Bgr_17550
NADPH-dependent FMN reductase.
     
 0.550
Bgr_15040
Putative universal stress protein UspA.
 
   
 0.542
trxB
Thioredoxin reductase TrxB.
  
  
 0.541
macB
ABC transporter, ATP-binding protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
  
 0.534
Bgr_11910
Sensor histidine kinase.
     
 0.532
nmoB
4-hydroxyphenylacetate 3-monooxygenase.
     
 0.531
Your Current Organism:
Bartonella grahamii
NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.