STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpX4Phage tail protein X4. (84 aa)    
Predicted Functional Partners:
gpU4
Phage tail protein U4.
  
   0.926
gpD4
Phage late control protein D4.
  
    0.882
gpJ1
Phage baseplate assembly protein GpJ1.
  
 
 0.773
gpJ2
Phage baseplate assembly protein GpJ2.
  
 
 0.773
dnaB4
Replicative DNA helicase DnaB.
       0.773
Bgr_03410
Phage protein.
  
 
 0.765
Bgr_08890
Phage protein.
  
 
 0.765
gpW1
Phage baseplate assembly protein GpW1.
  
   0.729
gpW2
Phage baseplate assembly protein GpW2.
  
   0.729
gpW3
Phage baseplate assembly protein gpW3.
  
   0.729
Your Current Organism:
Bartonella grahamii
NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.