STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vceAMultidrug resistance protein VceA. (364 aa)    
Predicted Functional Partners:
vceB
Multidrug resistance protein VceB; Belongs to the major facilitator superfamily.
 
 
 0.970
macB
ABC transporter, ATP-binding protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 0.934
Bgr_18990
Putative outer membrane efflux protein.
 
 
 0.930
Bgr_18800
Transport protein transmembrane.
 
 
 0.881
tolC
Type I secretion outer membrane protein TolC.
  
 
 0.849
Bgr_05020
Toxin secretion protein, HlyB family.
  
 
 0.826
Bgr_12290
Major facilitator family transporter.
 
 
 0.781
Bgr_02220
Transport transmembrane protein.
 
   0.583
Bgr_12300
Putative permease of the major facilitator superfamily.
 
 
 0.540
Bgr_01470
Major facilitator family transporter.
 
   0.517
Your Current Organism:
Bartonella grahamii
NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.