gpU5 protein (Bartonella grahamii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

gpU5

Phage tail protein U5. (153 aa)

Predicted Functional Partners:

gpD5

0.973

gpFI-3

0.955

gpX2

0.946

gpJ1

0.945

gpJ2

0.945

gpX1

0.942

gpFII

0.942

gpFII-2

0.942

gpW3

0.936

gpW1

0.935

Your Current Organism:

Bartonella grahamii

NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
gpD5	gpFI-3	Bgr_16160	Bgr_16220	Phage late control protein D5.	Phage tail sheath protein FI.	0.964
gpD5	gpFII	Bgr_16160	Bgr_03360	Phage late control protein D5.	Phage tail tube protein FII.	0.905
gpD5	gpFII-2	Bgr_16160	Bgr_08790	Phage late control protein D5.	Phage tail tube protein FII.	0.905
gpD5	gpJ1	Bgr_16160	Bgr_03420	Phage late control protein D5.	Phage baseplate assembly protein GpJ1.	0.907
gpD5	gpJ2	Bgr_16160	Bgr_08900	Phage late control protein D5.	Phage baseplate assembly protein GpJ2.	0.907
gpD5	gpU5	Bgr_16160	Bgr_16180	Phage late control protein D5.	Phage tail protein U5.	0.973
gpD5	gpW1	Bgr_16160	Bgr_03430	Phage late control protein D5.	Phage baseplate assembly protein GpW1.	0.953
gpD5	gpW3	Bgr_16160	Bgr_16280	Phage late control protein D5.	Phage baseplate assembly protein gpW3.	0.953
gpD5	gpX1	Bgr_16160	Bgr_03320	Phage late control protein D5.	Phage tail protein X1.	0.907
gpD5	gpX2	Bgr_16160	Bgr_08750	Phage late control protein D5.	Phage tail protein X2.	0.907
gpFI-3	gpD5	Bgr_16220	Bgr_16160	Phage tail sheath protein FI.	Phage late control protein D5.	0.964
gpFI-3	gpFII	Bgr_16220	Bgr_03360	Phage tail sheath protein FI.	Phage tail tube protein FII.	0.964
gpFI-3	gpFII-2	Bgr_16220	Bgr_08790	Phage tail sheath protein FI.	Phage tail tube protein FII.	0.964
gpFI-3	gpJ1	Bgr_16220	Bgr_03420	Phage tail sheath protein FI.	Phage baseplate assembly protein GpJ1.	0.955
gpFI-3	gpJ2	Bgr_16220	Bgr_08900	Phage tail sheath protein FI.	Phage baseplate assembly protein GpJ2.	0.955
gpFI-3	gpU5	Bgr_16220	Bgr_16180	Phage tail sheath protein FI.	Phage tail protein U5.	0.955
gpFI-3	gpW1	Bgr_16220	Bgr_03430	Phage tail sheath protein FI.	Phage baseplate assembly protein GpW1.	0.960
gpFI-3	gpW3	Bgr_16220	Bgr_16280	Phage tail sheath protein FI.	Phage baseplate assembly protein gpW3.	0.960
gpFI-3	gpX1	Bgr_16220	Bgr_03320	Phage tail sheath protein FI.	Phage tail protein X1.	0.956
gpFI-3	gpX2	Bgr_16220	Bgr_08750	Phage tail sheath protein FI.	Phage tail protein X2.	0.956