STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bgr_17850Hypothetical disulfide bond formation protein B. (190 aa)    
Predicted Functional Partners:
Bgr_17840
Hypothetical membrane protein.
       0.761
Bgr_04900
DSBA oxidoreductase.
 
 
 0.712
Bgr_11250
Outer membrane protein.
  
 
 0.652
Bgr_05430
Hypothetical protein.
 
     0.559
Bgr_14390
Hypothetical protein.
  
     0.558
Bgr_02860
2'-deoxycytidine 5'-triphosphate deaminase.
  
     0.550
Bgr_11430
Small protein A, outer membrane lipoprotein.
  
     0.547
Bgr_14420
Hypothetical protein.
  
     0.541
Bgr_18320
Hypothetical protein.
  
     0.523
Bgr_18570
Hypothetical protein.
  
     0.474
Your Current Organism:
Bartonella grahamii
NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.