STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vblB2VblB2 protein. (116 aa)    
Predicted Functional Partners:
vblB4
VblB4 protein.
 
 
 
 0.929
virB2
VirB2 protein.
  
  
 
0.915
vblB9
VblB9 protein.
 
   
 0.823
vblB8
VblB8 protein.
 
   
 0.806
vblB10
VblB10 protein.
 
   
 0.795
virB4
VirB4 protein.
 
 
 
 0.792
virB9
VirB9 protein.
 
   
 0.789
vblB6
VblB6 protein.
 
   
 0.782
trwK
TrwK protein.
 
 
 
 0.773
trwF
TrwF protein.
 
   
 0.773
Your Current Organism:
Bartonella grahamii
NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.