Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Bgr_05020 | Bgr_18480 | Bgr_05020 | Bgr_18480 | Toxin secretion protein, HlyB family. | ABC transporter, ATP-binding protein (fragment). | 0.929 |
| Bgr_06040 | Bgr_18480 | Bgr_06040 | Bgr_18480 | ABC transporter, ATP-binding protein. | ABC transporter, ATP-binding protein (fragment). | 0.639 |
| Bgr_14460 | Bgr_18480 | Bgr_14460 | Bgr_18480 | Oxidoreductase. | ABC transporter, ATP-binding protein (fragment). | 0.486 |
| Bgr_14460 | acpP1 | Bgr_14460 | Bgr_06190 | Oxidoreductase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.485 |
| Bgr_14460 | acpP2 | Bgr_14460 | Bgr_11570 | Oxidoreductase. | Acyl carrier protein. | 0.545 |
| Bgr_18480 | Bgr_05020 | Bgr_18480 | Bgr_05020 | ABC transporter, ATP-binding protein (fragment). | Toxin secretion protein, HlyB family. | 0.929 |
| Bgr_18480 | Bgr_06040 | Bgr_18480 | Bgr_06040 | ABC transporter, ATP-binding protein (fragment). | ABC transporter, ATP-binding protein. | 0.639 |
| Bgr_18480 | Bgr_14460 | Bgr_18480 | Bgr_14460 | ABC transporter, ATP-binding protein (fragment). | Oxidoreductase. | 0.486 |
| Bgr_18480 | acpP1 | Bgr_18480 | Bgr_06190 | ABC transporter, ATP-binding protein (fragment). | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.510 |
| Bgr_18480 | acpP2 | Bgr_18480 | Bgr_11570 | ABC transporter, ATP-binding protein (fragment). | Acyl carrier protein. | 0.510 |
| Bgr_18480 | dnaK | Bgr_18480 | Bgr_00640 | ABC transporter, ATP-binding protein (fragment). | Heat shock protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.467 |
| Bgr_18480 | infB | Bgr_18480 | Bgr_02250 | ABC transporter, ATP-binding protein (fragment). | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.527 |
| Bgr_18480 | rpsQ | Bgr_18480 | Bgr_13170 | ABC transporter, ATP-binding protein (fragment). | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.471 |
| Bgr_18480 | sodB | Bgr_18480 | Bgr_04980 | ABC transporter, ATP-binding protein (fragment). | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.536 |
| Bgr_18480 | ybeY | Bgr_18480 | Bgr_02340 | ABC transporter, ATP-binding protein (fragment). | Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.527 |
| acpP1 | Bgr_14460 | Bgr_06190 | Bgr_14460 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Oxidoreductase. | 0.485 |
| acpP1 | Bgr_18480 | Bgr_06190 | Bgr_18480 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | ABC transporter, ATP-binding protein (fragment). | 0.510 |
| acpP1 | infB | Bgr_06190 | Bgr_02250 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.621 |
| acpP1 | rpsQ | Bgr_06190 | Bgr_13170 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.611 |
| acpP1 | ybeY | Bgr_06190 | Bgr_02340 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.587 |
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