STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trwKTrwK protein. (823 aa)    
Predicted Functional Partners:
trwM
TrwM protein.
 
 
 0.989
trwG
TrwG protein.
 
 
 0.968
virB8
VirB8 protein.
 
 
 0.957
vblB8
VblB8 protein.
 
 
 0.957
virB9
VirB9 protein.
 
  
 0.938
trwF
TrwF protein.
 
  
 0.917
trwE
TrwE protein.
 
  
 0.917
trwI1
TrwI1 protein.
 
  
 0.911
virB4
VirB4 protein.
  
  
 
0.909
vblB4
VblB4 protein.
  
  
 
0.909
Your Current Organism:
Bartonella grahamii
NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.